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Tamarin: Principles of Genetics, Seventh Edition
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Back Matter
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Appendix B: Suggestions for Further Reading
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The McGraw Hill Companies, 2001
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Appendix B
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Suggestions for Further Reading
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Miller, O., Jr., et al. 1970. Electron microscopic visualization of transcription. Cold Spring Harbor Symposium on Quantitative Biology 35:505 12. Mistell, T., J. Caceres, and D. Spector. 1997. The dynamics of pre-mRNA splicing factor in living cells. Nature 387:523 27. Murray, H., and K. Jarrell. 1999. Flipping the switch to an active spliceosome. Cell 96:599 602. Naryshkin, N., et al. 2000. Structural organization of the RNA polymerasepromoter open complex. Cell 101:601 11. Nikolov, D., and S. Burley. 1997. RNA polymerase II transcription initiation: a structural view. Proceedings of the National Academy of Sciences, USA 94:15 22. Olson, M., M. Dundr, and A. Szebeni. 2000. The nucleolus: An old factory with unexpected capabilities. Trends in Cell Biology 10:189 96. Pabo, C., and R. Sauer. 1992. Transcription factors: Structural families and principles of DNA recognition. Annual Review of Biochemistry 61:1053 95. Peterson, M., et al. 1991. Structure and functional properties of human general transcription factor IIE. Nature 354:369 73. Pley, H., K. Flaherty, and D. McKay. 1994. Three-dimensional structure of a hammerhead ribozyme. Nature 372:68 74. Proudfoot, N. 1996. Ending the message is not so simple. Cell 87:779 81. Ptashne, M., and A. Gann. 1997. Transcriptional activation by recruitment. Nature 386:569 77. Pyle, A. 1993. Ribozymes: A distinct class of metalloenzymes. Science 261:709 14. Rich, A. 1993. The structure and biology of transfer RNA. Structure 1:vi vii. Riesner, D., and H. Gross. 1985.Viroids. Annual Review of Biochemistry 54:531 64. Roeder, R. 1996. The role of general initiation factors in transcription by RNA polymerase II. Trends in Biochemical Sciences 21:327 35. Ross, W., et al. 1993. A third recognition element in bacterial promoters: DNA binding by the subunit of RNA polymerase. Science 262:1407 13. Schafer, D., et al. 1991. Transcription by single molecules of RNA polymerase observed by light microscopy. Nature 352:444 48. Scheer, U., and R. Hock. 1999. Structure and function of the nucleolus. Current Opinion in Cell Biology 11:385 90. Scott, W., and A. Klug. 1996. Ribozymes: Structure and mechanism in RNA catalysis. Trends in Biochemical Sciences 21:220 24. Sharp, P. 1994. Split genes and RNA splicing. Cell 77:805 15.
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Shih, M.-C., P. Heinrich, and H. Goodman. 1988. Intron existence predated the divergence of eukaryotes and prokaryotes. Science 242:1164 66. Shimamoto, A., et al. 1996. A unique human gene that spans over 230 kb in the human chromosome 8p11-12 and codes multiple family proteins sharing RNA-binding motifs. Proceedings of the National Academy of Sciences, USA 93: 10913 17. Sleeman, J., and A. Lamond. 1999. Nuclear organization of pre-mRNA splicing factors. Current Opinion in Cell Biology 11:372 77. Smith, C., and J. Steitz. 1997. Sno storm in the nucleolus: new roles for myriad small RNPs. Cell 89:669 72. Smith, C., J. Patton, and B. Nadal-Ginard. 1989. Alternative splicing in the control of gene expression. Annual Review of Genetics 23:527 77. Steinmetz, E., and T. Platt. 1994. Evidence supporting a tethered tracking model for helicase activity of Escherichia coli rho factor. Proceedings of the National Academy of Sciences. USA 91:1401 5. Steitz, J. 1988. Snurps. Scienti c American, June, 56 63. Stillman, B., ed. 1998. Mechanisms of Transcription. Cold Spring Harbor, N. Y.: Cold Spring Harbor Laboratory Press. Stoltzfus, A., et al. 1994. Testing the exon theory of genes: The evidence from protein structure. Science 265:202 7. Tarn, W.-Y., and J. Steitz. 1997. Pre-mRNA splicing: The discovery of a new spliceosome doubles the challenge. Trends in Biochemical Sciences 22:132 37. Tennyson, C., H. Klamut, and R. Worton. 1995. The human dystrophin gene requires 16 hours to be transcribed and is cotranscriptionally spliced. Nature Genetics 9:184 90. Tjian, R. 1995. Molecular machines that control genes. Scienti c American, February, 54 61. Tjian, R., and T. Maniatis. 1994. Transcriptional activation: A complex puzzle with few easy pieces. Cell 77:5 8. Uptain, S., C. Kane, and M. Chamberlin. 1997. Basic mechanisms of transcript elongation and its regulation. Annual Review of Biochemistry 66:117 72. Venema, J., and D. Tollervey. 1999. Ribosome synthesis in Saccharomyces cerevisiae. Annual Review of Genetics 33: 261 311. Von Hippel, P. 1994. Passing lanes for polymerases Current Biology 4:333 36. Waldrop, M. 1992. Finding RNA makes proteins gives RNA world a big boost. Science 256:1396 97. Wang, J.-F., and T. Cech. 1992. Tertiary structure around the guanosine-binding
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site of the Tetrahymena ribozyme. Science 256:526 29. Wedekind, J., and D. McKay. 1998. Crystallographic structures of the hammerhead ribozyme: Relationship to ribozyme folding and catalysis. Annual Review of Biophysics and Biomolecular Structure 27:475 502. White, R. 1998. RNA Polymerase III Transcription. New York: Springer. Wieczorek, E., et al. 1998. Function of TAFII containing complex without TBP in transcription by RNA polymerase II. Nature 393:187 91. Will, C., et al. 1999. Identi cation of both shared and distinct proteins in the major and minor spliceosomes. Science 284:2003 5. Wolin, S., and A. Matera. 1999. The trials and travels of tRNA. Genes & Development 13:1 10. Woodson, S., and N. Leontis. 1998. Structure and dynamics of ribosomal RNA. Current Opinion in Structural Biology 8:294 300. Zaug, A., and T. Cech. 1986. The intervening sequence RNA of Tetrahymena is an enzyme. Science 231:470 75. Zawel, L., and D. Reinberg. 1995. Common themes in assembly and function of eukaryotic transcription complexes. Annual Review of Biochemistry 64:533 61. Zeigler, D., and D. Dean. 1990. Orientation of genes in the Bacillus subtilis chromosome. Genetics 125:703 8. Zorio, D., et al. 1994. Operons as a common form of chromosomal organization in C. elegans. Nature 372:270 72. 11 Gene Expression: Translation Arnez, J., and D. Moras. 1997. Structural and functional considerations of the aminoacylation reaction. Trends in Biochemical Sciences 22:211 16. Batey, R., et al. 2000. Crystal structure of the ribonucleoprotein core of the signal recognition particle. Science 287:1232 39. Berchtold, H., et al. 1993. Crystal structure of active elongation factor Tu reveals major domain rearrangements. Nature 365:126 32. Bernabeu, C., and J. Lake. 1982. Nascent polypeptide chains emerge from the exit domain of the large ribosomal subunit: Immune mapping of the nascent chains. Proceedings of the National Academy of Sciences, USA 79:3111 15. Boyd, L., and C. Thummel. 1993. Selection of CUG and AUG initiator codons for Drosophila E74A translation depends on downstream sequences. Proceedings of the National Academy of Sciences, USA 90:9164 67.
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