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Appendix B: Suggestions for Further Reading
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Appendix B
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Lindahl, T., and R. Wood. 1999. Quality control by DNA repair. Science 286:1897 1905. Luria, S., and M. Delbr ck. 1943. Mutations of bacteria from virus sensitivity to virus resistance. Genetics 28:491 511. McCullough, A, M. Dodson, and R. Lloyd. 1999. Initiation of base excision repair: Glycosylase mechanisms and structures. Annual Review of Biochemistry 68:255 85. Modrich, P., and R. Lahue. 1996. Mismatch repair in replication delity, genetic recombination, and cancer biology. Annual Review of Biochemistry 65:101 33. Mol, C., et al. 1999. DNA repair mechanisms for the recognition and removal of damaged DNA bases. Annual Review of Biophysics and Biomolecular Structure 28:101 28. Morgan, A. 1993. Base mismatches and mutagenesis: How important is tautomerism Trends in Biochemical Sciences 18:160 63. Muller, H. 1927. Arti cial transmutation of the gene. Science 66:84 87. Neel, J. 1994. Physician to the Gene Pool: Genetic Lessons and Other Stories. New York: Wiley. Ortiz-Lombardia, M., et al. 1999. Crystal structure of a DNA Holliday junction. Nature Structural Biology 6:913 17. Parikh, S., C. Mol, and J. Tainer. 1997. Base excision repair enzyme family portrait: Integrating the structure and chemistry of an entire DNA repair pathway. Structure 5:1543 50. Potter, H., and D. Dressler. 1976. On the mechanism of genetic recombination: Electron microscopic observation of recombination intermediates. Proceedings of the National Academy of Sciences, USA 73:3000 3004. Puchta, H., and B. Hohn. 1996. From centimorgans to base pairs: homologous recombination in plants. Trends in Plant Science 1:340 48. Rafferty, J., et al. 1996. Crystal structure of DNA recombination protein RuvA and a model for its binding to the Holliday junction. Science 274:415 21. Richardson, C., and M. Jasin. 2000. Frequent chromosomal translocations induced by DNA double-strand breaks. Nature 405:697 700. Ripley, L. 1990. Frameshift mutation: Determinants of speci city. Annual Review of Genetics 24:189 213. Roberts, R., and X. Cheng. 1998. Base ipping. Annual Review of Biochemistry 67:181 98. Roman, H., and M. Ruzinski. 1990. Mechanisms of gene conversion in Saccharomyces cerevisiae. Genetics 124:7 25.
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Rosche, W., P. Foster, and J. Cairns. 1999. The role of transient hypermutators in adaptive mutation in Escherichia coli. Proceedings of the National Academy of Sciences, USA 96:6862 67. Sancar, A. 1996. DNA excision repair. Annual Review of Biochemistry 65:43 81. Singer, B., and J. Kusmierak. 1982. Chemical mutagenesis. Annual Review of Biochemistry 52:655 93. Smith, M. 1985. In vitro mutagenesis. Annual Review of Genetics 19:423 62. Stadler, L. 1928. Mutations in barley induced by X rays and radium. Science 68:186 87. Stahl, F. 1994. The Holliday junction on its thirtieth anniversary. Genetics 138:241 46. . 1996. Meiotic recombination in yeast: coronation of the double-strand-break repair model. Cell 87:965 68. Story, R., I. Weber, and T. Steitz. 1992. The structure of E. coli RecA protein monomer and polymer. Nature 355:318 25 (Erratum, p.567). Streisinger, G., and J. Owen. 1985. Mechanisms of spontaneous and induced frameshift mutation in bacteriophage T4. Genetics 109:633 59. Tanaka, K., and R. Wood. 1994. Xeroderma pigmentosum and nucleotide excision repair of DNA. Trends in Biochemical Sciences 19:83 86. Tang, M., et al. 2000. Roles of E. coli DNA polymerases IV and V in lesion-targeted and untargeted SOS mutagenesis. Nature 404:1014 18. Tennant, R., et al. 1987. Prediction of chemical carcinogenicity in rodents from in vitro genetic toxicity assays. Science 236:933 41. Van Dyck, E., et al. 1999. Binding of double-strand breaks in DNA by human Rad52 protein. Nature 398:728 31. Washington, M., et al. 2000. Accuracy of thymine-thymine dimer bypass by Saccharomyces cerevisiae DNA polymerase . Proceedings of the National Academy of Sciences, USA 97:3094 99. West, S. 1994. The processing of recombination intermediates: Mechanistic insights from studies of bacterial proteins. Cell 76:9 15. . 1997. Processing of recombination intermediates by the RuvABC proteins. Annual Review of Genetics 31:213 44. Wood, R. 1996. DNA repair in eukaryotes. Annual Review of Biochemistry 65:135 67. Yanofsky, C., et al. 1967. The complete amino-acid sequence of the tryptophan synthetase A protein (a subunit) and its colinear relationship with the genetic map of the A gene. Proceedings of the National Academy of Sciences, USA 57:296 98.
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13 Genomics, Biotechnology, and Recombinant DNA Abelson, P., and P. Hines. 1999. The plant revolution. Science 285:367 68. (Followed by seven articles on plant genomics.) Adams, M., et al. 2000. The genome sequence of Drosophila melanogaster. Science 287:2185 95. (Followed by seven related articles.) Adelman, J., et al. 1987. Two mammalian genes transcribed from opposite strands of the same DNA locus. Science 235:1514 17. Andreason, G., and G. Evans. 1988. Introduction and expression of DNA molecules in eukaryotic cells by electroporation. BioTechniques 6:650 60. Armour, J., and A. Jeffreys. 1992. Biology and applications of human minisatellite loci. Current Opinion in Genetics and Development 2:850 56. Arnheim, N., and H. Erlich. 1992. Polymerase chain reaction strategy. Annual Review of Biochemistry 61:131 56. Ayala, F., and B. Black. 1993. Science and the courts. American Scientist 81:230 39. Berg, P., and M. Singer. 1995. The recombinant DNA controversy: Twenty years later. Proceedings of the National Academy of Sciences, USA 92:9011 13. Blattner, F., et al. 1997. The complete genome sequence of Escherichia coli K12. Science 277:1453 62. Bolivar, F., et al. 1977. Construction and characterization of new cloning vehicles. II: A multipurpose cloning system. Gene 2:95 113. Brandon, E., R. Idzerda, and G. McKnight. 1995. Targeting the mouse genome: A compendium of knockouts. Current Biology, 5:625 34 (part I); 5:758 65 (part II); 5:873 81 (part III). Cai, W., et al. High-resolution restriction maps of bacterial arti cial chromosomes constructed by optical mapping. Proceedings of the National Academy of Sciences, USA 95:3390 95. Capecchi, M. 1994. Targeted gene replacement. Scienti c American, March, 52 59. Caruthers, M. 1985. Gene synthesis machines: DNA chemistry and its uses. Science 230:281 85. C. elegans Sequencing Consortium. 1998. Genome sequence of the nematode C. elegans: A platform for investigating biology. Science 282:2012 18. (Followed by ve articles.) Chu, T.-H., et al. 1995. Highly ef cient eukaryotic gene expression vectors for peptide secretion. BioTechniques 18:890 99. Cohen, J., and M. Hogan. 1994. The new genetic medicines. Scienti c American, December, 76 82.
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